Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSSC4Q9Y5U2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TSSC4Q9Y5U2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 SLC47A1P1-202ENST00000449666 945 ntBASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 DUX4L4-201ENST00000566884 1269 ntBASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 AL499627.2-201ENST00000606283 725 ntBASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TSSC4Q9Y5U2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AC104564.3-201ENST00000582367 638 ntBASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 AC092666.2-201ENST00000613287 246 ntBASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TSSC4Q9Y5U2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 LINC01529-204ENST00000636474 1715 ntBASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 TSPY26P-201ENST00000476365 1326 ntBASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 AC144652.1-201ENST00000609974 1624 ntBASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TSSC4Q9Y5U2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 AC020928.2-201ENST00000588717 2197 ntBASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSSC4Q9Y5U2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 IGHV3-19-201ENST00000521488 291 ntBASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.28■□□□□ 0.36
TSSC4Q9Y5U2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSSC4Q9Y5U2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TSSC4Q9Y5U2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms