Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA4Q9Y5G9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA4Q9Y5G9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA4Q9Y5G9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 MIR939-201ENST00000401314 82 ntBASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA4Q9Y5G9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 AP001330.3-201ENST00000520123 633 ntBASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA4Q9Y5G9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 DUX4L19-201ENST00000557448 1267 ntBASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGA4Q9Y5G9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA4Q9Y5G9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 MIR6821-201ENST00000617625 74 ntBASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGA4Q9Y5G9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 AC091305.1-201ENST00000479476 895 ntBASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGA4Q9Y5G9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGA4Q9Y5G9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 AC097381.1-201ENST00000429019 1296 ntBASIC21.69■■□□□ 1.06
PCDHGA4Q9Y5G9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms