Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA6Q9Y5G7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 AC104564.3-201ENST00000582367 638 ntBASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA6Q9Y5G7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 AC097381.1-201ENST00000429019 1296 ntBASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGA6Q9Y5G7 CLDN5-201ENST00000403084 2357 ntBASIC21.33■■□□□ 1
PCDHGA6Q9Y5G7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA6Q9Y5G7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA6Q9Y5G7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA6Q9Y5G7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 AC008764.7-201ENST00000593779 1081 ntBASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA6Q9Y5G7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 AC099791.1-201ENST00000416440 715 ntBASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA6Q9Y5G7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 AC009086.3-201ENST00000623486 1008 ntBASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA6Q9Y5G7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 IRS3P-201ENST00000223076 1006 ntBASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA6Q9Y5G7 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms