Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 AC090192.1-201ENST00000517740 490 ntBASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDHGA9Q9Y5G4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 AC068473.5-201ENST00000616428 2072 ntBASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 IGHV3-19-201ENST00000521488 291 ntBASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA9Q9Y5G4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 AP003733.4-201ENST00000623785 1697 ntBASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 MIR572-201ENST00000384983 95 ntBASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 AL031602.1-201ENST00000633169 911 ntBASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA9Q9Y5G4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L2-201ENST00000561772 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 AL354811.1-201ENST00000610286 706 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L6-201ENST00000626483 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L1-201ENST00000627662 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L8-201ENST00000629013 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L3-201ENST00000630187 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L7-201ENST00000630678 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 DUX4L5-201ENST00000630834 1275 ntBASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA9Q9Y5G4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA9Q9Y5G4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA9Q9Y5G4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 HLA-L-211ENST00000482052 1765 ntBASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms