Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 AC010997.5-201ENST00000609182 354 ntBASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 LINC00526-201ENST00000581067 1875 ntBASIC21■□□□□ 0.95
PCDHGB3Q9Y5G1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 GUSBP5-202ENST00000510805 1989 ntBASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 AC008406.3-201ENST00000620001 1374 ntBASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 MTDHP2-201ENST00000601468 714 ntBASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 AC005703.6-201ENST00000623265 1329 ntBASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGB3Q9Y5G1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 MIR6724-1-201ENST00000616420 92 ntBASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 MIR6724-2-201ENST00000616483 92 ntBASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 MIR6724-4-201ENST00000617390 92 ntBASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 MIR6724-3-201ENST00000622482 92 ntBASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGB3Q9Y5G1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGB3Q9Y5G1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 AC127496.7-201ENST00000625110 1798 ntBASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGB3Q9Y5G1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHGB3Q9Y5G1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGB3Q9Y5G1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGB3Q9Y5G1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms