Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 LINC01529-204ENST00000636474 1715 ntBASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 AF213884.3-201ENST00000563833 479 ntBASIC25.07■■□□□ 1.6
KDM3AQ9Y4C1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 AC011298.3-201ENST00000615796 283 ntBASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM3AQ9Y4C1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.05■■□□□ 1.6
KDM3AQ9Y4C1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 DUX4L4-201ENST00000566884 1269 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 MIR4767-201ENST00000582827 78 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 AC241377.3-202ENST00000626088 1088 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 AC241585.3-202ENST00000628937 1088 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 AC245100.8-202ENST00000629247 1058 ntBASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.04■■□□□ 1.6
KDM3AQ9Y4C1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM3AQ9Y4C1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM3AQ9Y4C1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.03■■□□□ 1.6
KDM3AQ9Y4C1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM3AQ9Y4C1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.03■■□□□ 1.6
KDM3AQ9Y4C1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 AC091305.1-201ENST00000479476 895 ntBASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.02■■□□□ 1.6
KDM3AQ9Y4C1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
KDM3AQ9Y4C1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 AC105265.2-201ENST00000467189 838 ntBASIC25■■□□□ 1.59
KDM3AQ9Y4C1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 RARRES2P6-201ENST00000567333 442 ntBASIC25■■□□□ 1.59
KDM3AQ9Y4C1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25■■□□□ 1.59
KDM3AQ9Y4C1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM3AQ9Y4C1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms