Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTCBQ9Y3I0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTCBQ9Y3I0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RTCBQ9Y3I0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 AC026185.1-201ENST00000445748 174 ntBASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 TPRG1LP1-201ENST00000598702 760 ntBASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.4■■■□□ 2.14
RTCBQ9Y3I0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
RTCBQ9Y3I0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.39■■■□□ 2.14
RTCBQ9Y3I0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTCBQ9Y3I0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 AC104771.1-201ENST00000603335 964 ntBASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 AP004607.4-201ENST00000530158 1459 ntBASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 LINC01529-204ENST00000636474 1715 ntBASIC28.37■■■□□ 2.13
RTCBQ9Y3I0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTCBQ9Y3I0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 BID-214ENST00000617586 542 ntTSL 5 BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 AC144652.1-201ENST00000609974 1624 ntBASIC28.35■■■□□ 2.13
RTCBQ9Y3I0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTCBQ9Y3I0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTCBQ9Y3I0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC28.34■■■□□ 2.13
RTCBQ9Y3I0 AC004854.2-201ENST00000608450 1441 ntBASIC28.34■■■□□ 2.13
RTCBQ9Y3I0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 AC135731.1-201ENST00000569415 2548 ntBASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.33■■■□□ 2.13
RTCBQ9Y3I0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.32■■■□□ 2.12
RTCBQ9Y3I0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.32■■■□□ 2.12
RTCBQ9Y3I0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms