Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TPRG1LP1-201ENST00000598702 760 ntBASIC30.74■■■□□ 2.51
PHF8Q9UPP1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
PHF8Q9UPP1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.74■■■□□ 2.51
PHF8Q9UPP1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PHF8Q9UPP1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.73■■■□□ 2.51
PHF8Q9UPP1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.73■■■□□ 2.51
PHF8Q9UPP1 AC137761.2-201ENST00000561729 223 ntBASIC30.73■■■□□ 2.51
PHF8Q9UPP1 AC145350.3-201ENST00000569033 163 ntBASIC30.73■■■□□ 2.51
PHF8Q9UPP1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.73■■■□□ 2.51
PHF8Q9UPP1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PHF8Q9UPP1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.73■■■□□ 2.51
PHF8Q9UPP1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PHF8Q9UPP1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 AC016769.1-201ENST00000409132 1010 ntBASIC30.71■■■□□ 2.51
PHF8Q9UPP1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.71■■■□□ 2.51
PHF8Q9UPP1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHF8Q9UPP1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHF8Q9UPP1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.7■■■□□ 2.51
PHF8Q9UPP1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.7■■■□□ 2.51
PHF8Q9UPP1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHF8Q9UPP1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PHF8Q9UPP1 AC135731.1-201ENST00000569415 2548 ntBASIC30.7■■■□□ 2.5
PHF8Q9UPP1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.69■■■□□ 2.5
PHF8Q9UPP1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.68■■■□□ 2.5
PHF8Q9UPP1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.68■■■□□ 2.5
PHF8Q9UPP1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 AP004607.4-201ENST00000530158 1459 ntBASIC30.67■■■□□ 2.5
PHF8Q9UPP1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.67■■■□□ 2.5
PHF8Q9UPP1 LINC01529-204ENST00000636474 1715 ntBASIC30.67■■■□□ 2.5
PHF8Q9UPP1 AC144652.1-201ENST00000609974 1624 ntBASIC30.66■■■□□ 2.5
PHF8Q9UPP1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.66■■■□□ 2.5
PHF8Q9UPP1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.66■■■□□ 2.5
PHF8Q9UPP1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PHF8Q9UPP1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PHF8Q9UPP1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.66■■■□□ 2.5
PHF8Q9UPP1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PHF8Q9UPP1 AC026185.1-201ENST00000445748 174 ntBASIC30.65■■■□□ 2.5
PHF8Q9UPP1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.65■■■□□ 2.5
PHF8Q9UPP1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
PHF8Q9UPP1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PHF8Q9UPP1 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.64■■■□□ 2.5
PHF8Q9UPP1 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.64■■■□□ 2.5
PHF8Q9UPP1 AC104771.1-201ENST00000603335 964 ntBASIC30.64■■■□□ 2.5
PHF8Q9UPP1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
PHF8Q9UPP1 AC004854.2-201ENST00000608450 1441 ntBASIC30.64■■■□□ 2.49
PHF8Q9UPP1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.63■■■□□ 2.49
PHF8Q9UPP1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHF8Q9UPP1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHF8Q9UPP1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHF8Q9UPP1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHF8Q9UPP1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHF8Q9UPP1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PHF8Q9UPP1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
PHF8Q9UPP1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
PHF8Q9UPP1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PHF8Q9UPP1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms