Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 IRS3P-201ENST00000223076 1006 ntBASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCF1Q9UBD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 AC026271.2-201ENST00000428091 497 ntBASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 AC010525.1-201ENST00000585559 441 ntBASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLCF1Q9UBD9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.79■□□□□ 0.76
CLCF1Q9UBD9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CLCF1Q9UBD9 TSPY26P-201ENST00000476365 1326 ntBASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 IGHV3-19-201ENST00000521488 291 ntBASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLCF1Q9UBD9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCF1Q9UBD9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 AL353803.4-201ENST00000565882 1934 ntBASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCF1Q9UBD9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCF1Q9UBD9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms