Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MRPL39Q9NYK5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.27■□□□□ 0.83
MRPL39Q9NYK5 AC005703.6-201ENST00000623265 1329 ntBASIC20.27■□□□□ 0.83
MRPL39Q9NYK5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 DUSP8P3-201ENST00000399571 1760 ntBASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MRPL39Q9NYK5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPL39Q9NYK5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRPL39Q9NYK5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 MTDHP2-201ENST00000601468 714 ntBASIC20.23■□□□□ 0.83
MRPL39Q9NYK5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPL39Q9NYK5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 AC079630.1-202ENST00000618127 1840 ntBASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
MRPL39Q9NYK5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MRPL39Q9NYK5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms