Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 AC239859.2-201ENST00000444165 318 ntBASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LIN7CQ9NUP9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LIN7CQ9NUP9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.39■□□□□ 0.54
LIN7CQ9NUP9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 AC242852.2-201ENST00000615738 1807 ntBASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LIN7CQ9NUP9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 AC079630.1-202ENST00000618127 1840 ntBASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 MIR4787-201ENST00000607364 84 ntBASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.38■□□□□ 0.53
LIN7CQ9NUP9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LIN7CQ9NUP9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LIN7CQ9NUP9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LIN7CQ9NUP9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LIN7CQ9NUP9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIN7CQ9NUP9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LIN7CQ9NUP9 AC137767.1-201ENST00000602918 1920 ntBASIC18.33■□□□□ 0.53
LIN7CQ9NUP9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LIN7CQ9NUP9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms