Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC126544.1-201ENST00000580842 1059 ntBASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC241377.3-202ENST00000626088 1088 ntBASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC241585.3-202ENST00000628937 1088 ntBASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC245100.8-202ENST00000629247 1058 ntBASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE5Q9HCH3 AC138932.3-201ENST00000567634 1902 ntBASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 C17orf82-201ENST00000623772 1530 ntBASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE5Q9HCH3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.36■■□□□ 1.01
CPNE5Q9HCH3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 TSPY26P-201ENST00000476365 1326 ntBASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE5Q9HCH3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 HLA-L-209ENST00000420110 1011 ntBASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 AC009086.3-201ENST00000623486 1008 ntBASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 AC131274.2-201ENST00000580697 1507 ntBASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE5Q9HCH3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE5Q9HCH3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE5Q9HCH3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE5Q9HCH3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CPNE5Q9HCH3 AC022211.4-201ENST00000625094 2161 ntBASIC21.33■■□□□ 1
CPNE5Q9HCH3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPNE5Q9HCH3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE5Q9HCH3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.32■■□□□ 1
CPNE5Q9HCH3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CPNE5Q9HCH3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE5Q9HCH3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
CPNE5Q9HCH3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE5Q9HCH3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE5Q9HCH3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE5Q9HCH3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 MIR6084-201ENST00000622012 110 ntBASIC21.31■■□□□ 1
CPNE5Q9HCH3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.31■■□□□ 1
CPNE5Q9HCH3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE5Q9HCH3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CPNE5Q9HCH3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE5Q9HCH3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE5Q9HCH3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CPNE5Q9HCH3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.3■■□□□ 1
CPNE5Q9HCH3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms