Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 FP325331.1-202ENST00000623531 1380 ntBASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TRPM3Q9HCF6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRPM3Q9HCF6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.45■■■□□ 2.47
TRPM3Q9HCF6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.45■■■□□ 2.47
TRPM3Q9HCF6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.45■■■□□ 2.47
TRPM3Q9HCF6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TRPM3Q9HCF6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.45■■■□□ 2.46
TRPM3Q9HCF6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.45■■■□□ 2.46
TRPM3Q9HCF6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
TRPM3Q9HCF6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TRPM3Q9HCF6 AC004854.2-201ENST00000608450 1441 ntBASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 AP004607.4-201ENST00000530158 1459 ntBASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.43■■■□□ 2.46
TRPM3Q9HCF6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 CROCCP5-201ENST00000436658 830 ntBASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 AC026185.1-201ENST00000445748 174 ntBASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
TRPM3Q9HCF6 AC144652.1-201ENST00000609974 1624 ntBASIC30.41■■■□□ 2.46
TRPM3Q9HCF6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.41■■■□□ 2.46
TRPM3Q9HCF6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TRPM3Q9HCF6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TRPM3Q9HCF6 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.41■■■□□ 2.46
TRPM3Q9HCF6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TRPM3Q9HCF6 MIR663A-201ENST00000385250 93 ntBASIC30.4■■■□□ 2.46
TRPM3Q9HCF6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
TRPM3Q9HCF6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
TRPM3Q9HCF6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TRPM3Q9HCF6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.39■■■□□ 2.45
TRPM3Q9HCF6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.39■■■□□ 2.45
TRPM3Q9HCF6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
TRPM3Q9HCF6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.39■■■□□ 2.45
TRPM3Q9HCF6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TRPM3Q9HCF6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRPM3Q9HCF6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TRPM3Q9HCF6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TRPM3Q9HCF6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TRPM3Q9HCF6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms