Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 AL355001.2-201ENST00000620617 1191 ntBASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.74■■□□□ 1.23
RETREG1Q9H6L5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RETREG1Q9H6L5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 MIR4767-201ENST00000582827 78 ntBASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RETREG1Q9H6L5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 BX842568.3-201ENST00000418104 571 ntBASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 AC068587.7-201ENST00000641602 218 ntBASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.71■■□□□ 1.23
RETREG1Q9H6L5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RETREG1Q9H6L5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.7■■□□□ 1.22
RETREG1Q9H6L5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RETREG1Q9H6L5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 MIR638-201ENST00000385237 100 ntBASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.68■■□□□ 1.22
RETREG1Q9H6L5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 SUDS3P1-201ENST00000505831 966 ntBASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 AC233992.3-201ENST00000607491 485 ntBASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 AL031432.3-201ENST00000607698 485 ntBASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG1Q9H6L5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 AC005837.3-201ENST00000612163 286 ntBASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.66■■□□□ 1.22
RETREG1Q9H6L5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms