Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.66■■□□□ 1.22
CDC42EP4Q9H3Q1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.66■■□□□ 1.22
CDC42EP4Q9H3Q1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.66■■□□□ 1.22
CDC42EP4Q9H3Q1 AC120024.1-201ENST00000562672 995 ntBASIC22.66■■□□□ 1.22
CDC42EP4Q9H3Q1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42EP4Q9H3Q1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 KRT18P60-201ENST00000312876 1297 ntBASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 FBXW4P1-201ENST00000426721 2239 ntBASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CDC42EP4Q9H3Q1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42EP4Q9H3Q1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.64■■□□□ 1.22
CDC42EP4Q9H3Q1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42EP4Q9H3Q1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42EP4Q9H3Q1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42EP4Q9H3Q1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 RARRES2P2-201ENST00000394842 485 ntBASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 AC004448.1-201ENST00000458332 883 ntBASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 AL024507.2-201ENST00000606070 2574 ntBASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42EP4Q9H3Q1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.63■■□□□ 1.21
CDC42EP4Q9H3Q1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42EP4Q9H3Q1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42EP4Q9H3Q1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.63■■□□□ 1.21
CDC42EP4Q9H3Q1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42EP4Q9H3Q1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.61■■□□□ 1.21
CDC42EP4Q9H3Q1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42EP4Q9H3Q1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42EP4Q9H3Q1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.61■■□□□ 1.21
CDC42EP4Q9H3Q1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 AC139795.1-202ENST00000500444 432 ntBASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 MIR4281-201ENST00000580852 62 ntBASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42EP4Q9H3Q1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42EP4Q9H3Q1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CDC42EP4Q9H3Q1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42EP4Q9H3Q1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CDC42EP4Q9H3Q1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42EP4Q9H3Q1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42EP4Q9H3Q1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42EP4Q9H3Q1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42EP4Q9H3Q1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42EP4Q9H3Q1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42EP4Q9H3Q1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42EP4Q9H3Q1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 THA1P-201ENST00000590384 1145 ntBASIC22.56■■□□□ 1.2
CDC42EP4Q9H3Q1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms