Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.42■■□□□ 1.5
VPS16Q9H269 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
VPS16Q9H269 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
VPS16Q9H269 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
VPS16Q9H269 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
VPS16Q9H269 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
VPS16Q9H269 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VPS16Q9H269 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.41■■□□□ 1.5
VPS16Q9H269 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.41■■□□□ 1.5
VPS16Q9H269 AC144652.1-201ENST00000609974 1624 ntBASIC24.41■■□□□ 1.5
VPS16Q9H269 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
VPS16Q9H269 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
VPS16Q9H269 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
VPS16Q9H269 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.4■■□□□ 1.5
VPS16Q9H269 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.4■■□□□ 1.5
VPS16Q9H269 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.4■■□□□ 1.5
VPS16Q9H269 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.4■■□□□ 1.5
VPS16Q9H269 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.4■■□□□ 1.5
VPS16Q9H269 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS16Q9H269 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
VPS16Q9H269 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 AC127496.7-201ENST00000625110 1798 ntBASIC24.39■■□□□ 1.5
VPS16Q9H269 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS16Q9H269 AL031848.2-201ENST00000607670 837 ntBASIC24.39■■□□□ 1.49
VPS16Q9H269 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS16Q9H269 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS16Q9H269 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS16Q9H269 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.38■■□□□ 1.49
VPS16Q9H269 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
VPS16Q9H269 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.38■■□□□ 1.49
VPS16Q9H269 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
VPS16Q9H269 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.38■■□□□ 1.49
VPS16Q9H269 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
VPS16Q9H269 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.38■■□□□ 1.49
VPS16Q9H269 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
VPS16Q9H269 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
VPS16Q9H269 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.37■■□□□ 1.49
VPS16Q9H269 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
VPS16Q9H269 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
VPS16Q9H269 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
VPS16Q9H269 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
VPS16Q9H269 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.37■■□□□ 1.49
VPS16Q9H269 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
VPS16Q9H269 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
VPS16Q9H269 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
VPS16Q9H269 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
VPS16Q9H269 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
VPS16Q9H269 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS16Q9H269 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
VPS16Q9H269 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
VPS16Q9H269 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS16Q9H269 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.36■■□□□ 1.49
VPS16Q9H269 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.36■■□□□ 1.49
VPS16Q9H269 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS16Q9H269 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.36■■□□□ 1.49
VPS16Q9H269 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VPS16Q9H269 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS16Q9H269 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS16Q9H269 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS16Q9H269 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.35■■□□□ 1.49
VPS16Q9H269 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
VPS16Q9H269 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
VPS16Q9H269 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS16Q9H269 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS16Q9H269 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS16Q9H269 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS16Q9H269 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
VPS16Q9H269 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.34■■□□□ 1.49
VPS16Q9H269 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS16Q9H269 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS16Q9H269 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.34■■□□□ 1.49
VPS16Q9H269 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS16Q9H269 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
VPS16Q9H269 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.33■■□□□ 1.49
VPS16Q9H269 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS16Q9H269 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
VPS16Q9H269 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS16Q9H269 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
VPS16Q9H269 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS16Q9H269 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.33■■□□□ 1.49
VPS16Q9H269 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VPS16Q9H269 AC080038.3-201ENST00000623346 1952 ntBASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms