Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.17■■□□□ 1.94
VPS33BQ9H267 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
VPS33BQ9H267 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.17■■□□□ 1.94
VPS33BQ9H267 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
VPS33BQ9H267 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.16■■□□□ 1.94
VPS33BQ9H267 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
VPS33BQ9H267 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.16■■□□□ 1.94
VPS33BQ9H267 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
VPS33BQ9H267 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
VPS33BQ9H267 AP004607.4-201ENST00000530158 1459 ntBASIC27.15■■□□□ 1.94
VPS33BQ9H267 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
VPS33BQ9H267 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
VPS33BQ9H267 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
VPS33BQ9H267 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.15■■□□□ 1.94
VPS33BQ9H267 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.15■■□□□ 1.94
VPS33BQ9H267 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
VPS33BQ9H267 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.15■■□□□ 1.94
VPS33BQ9H267 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
VPS33BQ9H267 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
VPS33BQ9H267 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
VPS33BQ9H267 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
VPS33BQ9H267 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.14■■□□□ 1.94
VPS33BQ9H267 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
VPS33BQ9H267 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.14■■□□□ 1.94
VPS33BQ9H267 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
VPS33BQ9H267 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
VPS33BQ9H267 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.13■■□□□ 1.93
VPS33BQ9H267 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS33BQ9H267 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS33BQ9H267 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.12■■□□□ 1.93
VPS33BQ9H267 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
VPS33BQ9H267 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.12■■□□□ 1.93
VPS33BQ9H267 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS33BQ9H267 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
VPS33BQ9H267 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.11■■□□□ 1.93
VPS33BQ9H267 BID-214ENST00000617586 542 ntTSL 5 BASIC27.11■■□□□ 1.93
VPS33BQ9H267 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.11■■□□□ 1.93
VPS33BQ9H267 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
VPS33BQ9H267 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.1■■□□□ 1.93
VPS33BQ9H267 AC104771.1-201ENST00000603335 964 ntBASIC27.1■■□□□ 1.93
VPS33BQ9H267 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 AC068587.7-201ENST00000641602 218 ntBASIC27.1■■□□□ 1.93
VPS33BQ9H267 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
VPS33BQ9H267 AP003733.4-201ENST00000623785 1697 ntBASIC27.1■■□□□ 1.93
VPS33BQ9H267 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
VPS33BQ9H267 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 KRT19P1-201ENST00000405746 1186 ntBASIC27.09■■□□□ 1.93
VPS33BQ9H267 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.09■■□□□ 1.93
VPS33BQ9H267 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.09■■□□□ 1.93
VPS33BQ9H267 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 BX005040.4-201ENST00000637145 1518 ntBASIC27.09■■□□□ 1.93
VPS33BQ9H267 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
VPS33BQ9H267 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
VPS33BQ9H267 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.08■■□□□ 1.93
VPS33BQ9H267 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.08■■□□□ 1.93
VPS33BQ9H267 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.08■■□□□ 1.93
VPS33BQ9H267 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
VPS33BQ9H267 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
VPS33BQ9H267 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
VPS33BQ9H267 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.08■■□□□ 1.92
VPS33BQ9H267 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms