Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC141586.4-201ENST00000624558 1573 ntBASIC24.62■■□□□ 1.53
UBE2OQ9C0C9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.62■■□□□ 1.53
UBE2OQ9C0C9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
UBE2OQ9C0C9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
UBE2OQ9C0C9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBE2OQ9C0C9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 AC142086.2-201ENST00000569753 217 ntBASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2OQ9C0C9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBE2OQ9C0C9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
UBE2OQ9C0C9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBE2OQ9C0C9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
UBE2OQ9C0C9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.59■■□□□ 1.53
UBE2OQ9C0C9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 FAM201B-201ENST00000458407 597 ntBASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.58■■□□□ 1.53
UBE2OQ9C0C9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
UBE2OQ9C0C9 AP004607.4-201ENST00000530158 1459 ntBASIC24.58■■□□□ 1.52
UBE2OQ9C0C9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 AC133637.1-201ENST00000624115 1537 ntBASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 AC010525.1-201ENST00000585559 441 ntBASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.57■■□□□ 1.52
UBE2OQ9C0C9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 AC011767.1-201ENST00000617410 1153 ntBASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
UBE2OQ9C0C9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 AC004854.2-201ENST00000608450 1441 ntBASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
UBE2OQ9C0C9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 MIR4651-201ENST00000582622 73 ntBASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.54■■□□□ 1.52
UBE2OQ9C0C9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 DUX4L4-201ENST00000566884 1269 ntBASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE2OQ9C0C9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBE2OQ9C0C9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms