Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRDL1Q9BU40 AC127496.7-201ENST00000625110 1798 ntBASIC17.55■□□□□ 0.4
CHRDL1Q9BU40 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRDL1Q9BU40 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRDL1Q9BU40 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRDL1Q9BU40 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHRDL1Q9BU40 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 AC092068.2-201ENST00000590491 1708 ntBASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 LINC00565-201ENST00000562710 2331 ntBASIC17.52■□□□□ 0.39
CHRDL1Q9BU40 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRDL1Q9BU40 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 AL451085.2-201ENST00000605085 799 ntBASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 AC137767.1-201ENST00000602918 1920 ntBASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRDL1Q9BU40 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms