Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CMSS1Q9BQ75 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CMSS1Q9BQ75 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 THA1P-201ENST00000590384 1145 ntBASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 AF131216.4-201ENST00000638924 1588 ntBASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CMSS1Q9BQ75 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 AC242852.2-201ENST00000615738 1807 ntBASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 MIR4281-201ENST00000580852 62 ntBASIC18.86■□□□□ 0.61
CMSS1Q9BQ75 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 KRT18P24-201ENST00000344739 1156 ntBASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 AC004448.1-201ENST00000458332 883 ntBASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 ABHD17AP5-201ENST00000580133 923 ntBASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CMSS1Q9BQ75 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 NTF6A-201ENST00000591175 560 ntBASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 AC074183.2-201ENST00000623112 922 ntBASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CMSS1Q9BQ75 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CMSS1Q9BQ75 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CMSS1Q9BQ75 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 AL353803.4-201ENST00000565882 1934 ntBASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.82■□□□□ 0.6
CMSS1Q9BQ75 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms