Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USB1Q9BQ65 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.67■□□□□ 0.74
USB1Q9BQ65 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.67■□□□□ 0.74
USB1Q9BQ65 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.67■□□□□ 0.74
USB1Q9BQ65 AC136469.2-201ENST00000623944 1028 ntBASIC19.67■□□□□ 0.74
USB1Q9BQ65 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USB1Q9BQ65 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USB1Q9BQ65 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 AC091305.1-201ENST00000479476 895 ntBASIC19.66■□□□□ 0.74
USB1Q9BQ65 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.66■□□□□ 0.74
USB1Q9BQ65 AC079416.2-201ENST00000625035 1193 ntBASIC19.66■□□□□ 0.74
USB1Q9BQ65 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
USB1Q9BQ65 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.66■□□□□ 0.74
USB1Q9BQ65 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
USB1Q9BQ65 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
USB1Q9BQ65 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USB1Q9BQ65 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.65■□□□□ 0.74
USB1Q9BQ65 AL031432.3-201ENST00000607698 485 ntBASIC19.65■□□□□ 0.74
USB1Q9BQ65 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.65■□□□□ 0.74
USB1Q9BQ65 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USB1Q9BQ65 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USB1Q9BQ65 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USB1Q9BQ65 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.64■□□□□ 0.73
USB1Q9BQ65 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.64■□□□□ 0.73
USB1Q9BQ65 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.64■□□□□ 0.73
USB1Q9BQ65 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.64■□□□□ 0.73
USB1Q9BQ65 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.64■□□□□ 0.73
USB1Q9BQ65 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USB1Q9BQ65 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USB1Q9BQ65 SLC25A24-204ENST00000569674 2357 ntBASIC19.64■□□□□ 0.73
USB1Q9BQ65 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USB1Q9BQ65 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 AL121603.2-201ENST00000557373 2117 ntBASIC19.63■□□□□ 0.73
USB1Q9BQ65 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
USB1Q9BQ65 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 AC027682.1-201ENST00000562846 899 ntBASIC19.63■□□□□ 0.73
USB1Q9BQ65 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 LINC01124-201ENST00000409786 2117 ntBASIC19.63■□□□□ 0.73
USB1Q9BQ65 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USB1Q9BQ65 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.62■□□□□ 0.73
USB1Q9BQ65 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.62■□□□□ 0.73
USB1Q9BQ65 MIR939-201ENST00000401314 82 ntBASIC19.62■□□□□ 0.73
USB1Q9BQ65 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 MIR3181-201ENST00000578512 73 ntBASIC19.62■□□□□ 0.73
USB1Q9BQ65 MIR4767-201ENST00000582827 78 ntBASIC19.62■□□□□ 0.73
USB1Q9BQ65 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.62■□□□□ 0.73
USB1Q9BQ65 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.62■□□□□ 0.73
USB1Q9BQ65 AL136967.2-201ENST00000623968 743 ntBASIC19.62■□□□□ 0.73
USB1Q9BQ65 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USB1Q9BQ65 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USB1Q9BQ65 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 RASA4CP-201ENST00000424092 1398 ntBASIC19.61■□□□□ 0.73
USB1Q9BQ65 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USB1Q9BQ65 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.61■□□□□ 0.73
USB1Q9BQ65 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USB1Q9BQ65 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms