Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF5Q99942 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF5Q99942 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF5Q99942 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF5Q99942 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF5Q99942 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF5Q99942 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF5Q99942 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF5Q99942 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF5Q99942 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF5Q99942 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF5Q99942 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF5Q99942 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF5Q99942 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF5Q99942 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF5Q99942 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF5Q99942 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF5Q99942 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF5Q99942 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 SRD5A1P1-201ENST00000442297 786 ntBASIC17.74■□□□□ 0.43
RNF5Q99942 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF5Q99942 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF5Q99942 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF5Q99942 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RNF5Q99942 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF5Q99942 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
RNF5Q99942 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF5Q99942 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF5Q99942 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF5Q99942 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF5Q99942 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF5Q99942 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF5Q99942 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
RNF5Q99942 C9orf163-202ENST00000624034 2573 ntBASIC17.73■□□□□ 0.43
RNF5Q99942 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF5Q99942 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF5Q99942 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF5Q99942 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF5Q99942 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF5Q99942 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF5Q99942 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF5Q99942 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
RNF5Q99942 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF5Q99942 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF5Q99942 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF5Q99942 DUX4L19-201ENST00000557448 1267 ntBASIC17.71■□□□□ 0.43
RNF5Q99942 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF5Q99942 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms