Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SDHCQ99643 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHCQ99643 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SDHCQ99643 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.25■□□□□ 0.67
SDHCQ99643 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.25■□□□□ 0.67
SDHCQ99643 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 DUX4L29-201ENST00000425409 679 ntBASIC19.25■□□□□ 0.67
SDHCQ99643 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SDHCQ99643 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SDHCQ99643 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SDHCQ99643 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.24■□□□□ 0.67
SDHCQ99643 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHCQ99643 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHCQ99643 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.24■□□□□ 0.67
SDHCQ99643 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHCQ99643 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.24■□□□□ 0.67
SDHCQ99643 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SDHCQ99643 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SDHCQ99643 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHCQ99643 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.23■□□□□ 0.67
SDHCQ99643 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SDHCQ99643 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHCQ99643 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHCQ99643 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.22■□□□□ 0.67
SDHCQ99643 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SDHCQ99643 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHCQ99643 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHCQ99643 MIR3960-201ENST00000583311 91 ntBASIC19.22■□□□□ 0.67
SDHCQ99643 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHCQ99643 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDHCQ99643 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SDHCQ99643 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SDHCQ99643 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SDHCQ99643 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHCQ99643 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHCQ99643 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SDHCQ99643 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
SDHCQ99643 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 AC044849.2-201ENST00000606596 710 ntBASIC19.2■□□□□ 0.66
SDHCQ99643 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SDHCQ99643 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SDHCQ99643 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHCQ99643 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHCQ99643 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.19■□□□□ 0.66
SDHCQ99643 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 AF106564.1-201ENST00000607058 2553 ntBASIC19.19■□□□□ 0.66
SDHCQ99643 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHCQ99643 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 AL157400.5-201ENST00000507624 621 ntBASIC19.19■□□□□ 0.66
SDHCQ99643 LINC01971-201ENST00000617888 1048 ntBASIC19.19■□□□□ 0.66
SDHCQ99643 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.19■□□□□ 0.66
SDHCQ99643 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHCQ99643 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms