Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 AC137767.1-201ENST00000602918 1920 ntBASIC18.55■□□□□ 0.56
CLCC1Q96S66 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 AC019171.1-201ENST00000601251 1056 ntBASIC18.55■□□□□ 0.56
CLCC1Q96S66 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.54■□□□□ 0.56
CLCC1Q96S66 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCC1Q96S66 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCC1Q96S66 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCC1Q96S66 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCC1Q96S66 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCC1Q96S66 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLCC1Q96S66 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCC1Q96S66 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLCC1Q96S66 AC022616.5-201ENST00000518796 181 ntBASIC18.52■□□□□ 0.56
CLCC1Q96S66 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.52■□□□□ 0.56
CLCC1Q96S66 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.52■□□□□ 0.56
CLCC1Q96S66 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLCC1Q96S66 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.52■□□□□ 0.56
CLCC1Q96S66 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCC1Q96S66 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CLCC1Q96S66 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLCC1Q96S66 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCC1Q96S66 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCC1Q96S66 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCC1Q96S66 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.51■□□□□ 0.55
CLCC1Q96S66 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLCC1Q96S66 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCC1Q96S66 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.51■□□□□ 0.55
CLCC1Q96S66 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCC1Q96S66 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLCC1Q96S66 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLCC1Q96S66 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCC1Q96S66 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
CLCC1Q96S66 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCC1Q96S66 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 RNF165-205ENST00000588679 2904 ntBASIC18.49■□□□□ 0.55
CLCC1Q96S66 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCC1Q96S66 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCC1Q96S66 YBX1P4-201ENST00000392794 808 ntBASIC18.49■□□□□ 0.55
CLCC1Q96S66 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLCC1Q96S66 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms