Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.01■□□□□ 0.47
RAB40CQ96S21 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 AC087393.1-201ENST00000582896 145 ntBASIC18.01■□□□□ 0.47
RAB40CQ96S21 AC133552.2-201ENST00000619106 1032 ntBASIC18.01■□□□□ 0.47
RAB40CQ96S21 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB40CQ96S21 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40CQ96S21 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40CQ96S21 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40CQ96S21 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18■□□□□ 0.47
RAB40CQ96S21 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB40CQ96S21 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB40CQ96S21 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB40CQ96S21 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40CQ96S21 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAB40CQ96S21 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB40CQ96S21 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAB40CQ96S21 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40CQ96S21 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 AC011551.1-201ENST00000614101 683 ntBASIC17.98■□□□□ 0.47
RAB40CQ96S21 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40CQ96S21 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40CQ96S21 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40CQ96S21 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB40CQ96S21 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB40CQ96S21 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB40CQ96S21 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40CQ96S21 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAB40CQ96S21 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB40CQ96S21 FBXW4P1-201ENST00000426721 2239 ntBASIC17.96■□□□□ 0.47
RAB40CQ96S21 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB40CQ96S21 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RAB40CQ96S21 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40CQ96S21 RARRES2P2-201ENST00000394842 485 ntBASIC17.95■□□□□ 0.46
RAB40CQ96S21 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40CQ96S21 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB40CQ96S21 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40CQ96S21 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40CQ96S21 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40CQ96S21 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RAB40CQ96S21 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB40CQ96S21 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40CQ96S21 AL353803.4-201ENST00000565882 1934 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms