Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DUX3Q96PT4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.22■□□□□ 0.35
DUX3Q96PT4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.22■□□□□ 0.35
DUX3Q96PT4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DUX3Q96PT4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DUX3Q96PT4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DUX3Q96PT4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.22■□□□□ 0.35
DUX3Q96PT4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.21■□□□□ 0.35
DUX3Q96PT4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DUX3Q96PT4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.21■□□□□ 0.35
DUX3Q96PT4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.21■□□□□ 0.35
DUX3Q96PT4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DUX3Q96PT4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.2■□□□□ 0.34
DUX3Q96PT4 AC126544.1-201ENST00000580842 1059 ntBASIC17.2■□□□□ 0.34
DUX3Q96PT4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.2■□□□□ 0.34
DUX3Q96PT4 AC233992.3-201ENST00000607491 485 ntBASIC17.2■□□□□ 0.34
DUX3Q96PT4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.2■□□□□ 0.34
DUX3Q96PT4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DUX3Q96PT4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DUX3Q96PT4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DUX3Q96PT4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.19■□□□□ 0.34
DUX3Q96PT4 SLC47A1P1-202ENST00000449666 945 ntBASIC17.19■□□□□ 0.34
DUX3Q96PT4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.19■□□□□ 0.34
DUX3Q96PT4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DUX3Q96PT4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DUX3Q96PT4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DUX3Q96PT4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX3Q96PT4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 AC133637.1-201ENST00000624115 1537 ntBASIC17.18■□□□□ 0.34
DUX3Q96PT4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 BX842568.3-201ENST00000418104 571 ntBASIC17.18■□□□□ 0.34
DUX3Q96PT4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.18■□□□□ 0.34
DUX3Q96PT4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
DUX3Q96PT4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DUX3Q96PT4 AC144652.1-201ENST00000609974 1624 ntBASIC17.18■□□□□ 0.34
DUX3Q96PT4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.17■□□□□ 0.34
DUX3Q96PT4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.17■□□□□ 0.34
DUX3Q96PT4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DUX3Q96PT4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.16■□□□□ 0.34
DUX3Q96PT4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DUX3Q96PT4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms