Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 AL356740.2-201ENST00000601559 647 ntBASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MS4A4EQ96PG1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 AC233723.2-201ENST00000623798 2106 ntBASIC20.71■□□□□ 0.91
MS4A4EQ96PG1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
MS4A4EQ96PG1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 MIR3621-201ENST00000580529 85 ntBASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MS4A4EQ96PG1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 AL356441.2-201ENST00000443009 864 ntBASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A4EQ96PG1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.68■□□□□ 0.9
MS4A4EQ96PG1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 AC241377.3-202ENST00000626088 1088 ntBASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 AC241585.3-202ENST00000628937 1088 ntBASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 AC245100.8-202ENST00000629247 1058 ntBASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A4EQ96PG1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
MS4A4EQ96PG1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
MS4A4EQ96PG1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms