Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMD4Q96H15 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMD4Q96H15 ZNRF2P3-201ENST00000424200 374 ntBASIC18.67■□□□□ 0.58
TIMD4Q96H15 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMD4Q96H15 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMD4Q96H15 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMD4Q96H15 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMD4Q96H15 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.66■□□□□ 0.58
TIMD4Q96H15 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 ABCB10P4-201ENST00000566803 2184 ntBASIC18.66■□□□□ 0.58
TIMD4Q96H15 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.66■□□□□ 0.58
TIMD4Q96H15 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMD4Q96H15 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TIMD4Q96H15 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TIMD4Q96H15 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TIMD4Q96H15 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.65■□□□□ 0.58
TIMD4Q96H15 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.65■□□□□ 0.58
TIMD4Q96H15 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMD4Q96H15 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.64■□□□□ 0.58
TIMD4Q96H15 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TIMD4Q96H15 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMD4Q96H15 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TIMD4Q96H15 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMD4Q96H15 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.63■□□□□ 0.57
TIMD4Q96H15 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMD4Q96H15 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMD4Q96H15 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 SLC47A1P1-202ENST00000449666 945 ntBASIC18.62■□□□□ 0.57
TIMD4Q96H15 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMD4Q96H15 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIMD4Q96H15 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 AC079630.1-202ENST00000618127 1840 ntBASIC18.61■□□□□ 0.57
TIMD4Q96H15 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 IRS3P-201ENST00000223076 1006 ntBASIC18.61■□□□□ 0.57
TIMD4Q96H15 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 OR2I1P-207ENST00000453522 948 ntBASIC18.61■□□□□ 0.57
TIMD4Q96H15 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMD4Q96H15 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.61■□□□□ 0.57
TIMD4Q96H15 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TIMD4Q96H15 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TIMD4Q96H15 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms