Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 EDA-201ENST00000338901 1233 ntBASIC26.32■■□□□ 1.8
DDX11Q96FC9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 DUX4L19-201ENST00000557448 1267 ntBASIC26.32■■□□□ 1.8
DDX11Q96FC9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX11Q96FC9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
DDX11Q96FC9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX11Q96FC9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
DDX11Q96FC9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX11Q96FC9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX11Q96FC9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX11Q96FC9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
DDX11Q96FC9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.31■■□□□ 1.8
DDX11Q96FC9 AL355001.2-201ENST00000620617 1191 ntBASIC26.31■■□□□ 1.8
DDX11Q96FC9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX11Q96FC9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX11Q96FC9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX11Q96FC9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX11Q96FC9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX11Q96FC9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX11Q96FC9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX11Q96FC9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX11Q96FC9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
DDX11Q96FC9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX11Q96FC9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX11Q96FC9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX11Q96FC9 AC079630.1-202ENST00000618127 1840 ntBASIC26.28■■□□□ 1.8
DDX11Q96FC9 AC012676.1-201ENST00000574705 1949 ntBASIC26.28■■□□□ 1.8
DDX11Q96FC9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX11Q96FC9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX11Q96FC9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX11Q96FC9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
DDX11Q96FC9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
DDX11Q96FC9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DDX11Q96FC9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DDX11Q96FC9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX11Q96FC9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX11Q96FC9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 AC092171.4-201ENST00000609130 632 ntBASIC26.27■■□□□ 1.8
DDX11Q96FC9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX11Q96FC9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX11Q96FC9 SYT6-210ENST00000641643 1587 ntBASIC26.26■■□□□ 1.79
DDX11Q96FC9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.26■■□□□ 1.79
DDX11Q96FC9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
DDX11Q96FC9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX11Q96FC9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX11Q96FC9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX11Q96FC9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX11Q96FC9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX11Q96FC9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX11Q96FC9 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX11Q96FC9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX11Q96FC9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX11Q96FC9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX11Q96FC9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX11Q96FC9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX11Q96FC9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX11Q96FC9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.24■■□□□ 1.79
DDX11Q96FC9 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.24■■□□□ 1.79
DDX11Q96FC9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX11Q96FC9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms