Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPL53Q96EL3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 AC092053.2-201ENST00000640557 1818 ntBASIC16.68■□□□□ 0.26
MRPL53Q96EL3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRPL53Q96EL3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 AL031848.2-201ENST00000607670 837 ntBASIC16.67■□□□□ 0.26
MRPL53Q96EL3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRPL53Q96EL3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 CLDN5-201ENST00000403084 2357 ntBASIC16.66■□□□□ 0.26
MRPL53Q96EL3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 AC139530.1-201ENST00000575312 1977 ntBASIC16.66■□□□□ 0.26
MRPL53Q96EL3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 AC009086.3-201ENST00000623486 1008 ntBASIC16.66■□□□□ 0.26
MRPL53Q96EL3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MRPL53Q96EL3 AC021242.3-201ENST00000607598 1377 ntBASIC16.65■□□□□ 0.26
MRPL53Q96EL3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPL53Q96EL3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MRPL53Q96EL3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 DUX4L4-201ENST00000566884 1269 ntBASIC16.64■□□□□ 0.25
MRPL53Q96EL3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 AC087742.1-201ENST00000575880 1738 ntBASIC16.64■□□□□ 0.25
MRPL53Q96EL3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MRPL53Q96EL3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPL53Q96EL3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms