Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 SRD5A1P1-201ENST00000442297 786 ntBASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.22■□□□□ 0.67
APOBEC3DQ96AK3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APOBEC3DQ96AK3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 AL512631.2-201ENST00000604634 923 ntBASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 AC092171.4-201ENST00000609130 632 ntBASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APOBEC3DQ96AK3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOBEC3DQ96AK3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOBEC3DQ96AK3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 AC099791.2-201ENST00000605725 427 ntBASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.17■□□□□ 0.66
APOBEC3DQ96AK3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 AL499627.2-201ENST00000606283 725 ntBASIC19.16■□□□□ 0.66
APOBEC3DQ96AK3 AC131212.1-201ENST00000613771 668 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms