Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTPRUQ92729 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PTPRUQ92729 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PTPRUQ92729 AC026185.1-201ENST00000445748 174 ntBASIC31.54■■■□□ 2.64
PTPRUQ92729 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PTPRUQ92729 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.54■■■□□ 2.64
PTPRUQ92729 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.54■■■□□ 2.64
PTPRUQ92729 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.54■■■□□ 2.64
PTPRUQ92729 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTPRUQ92729 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTPRUQ92729 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.53■■■□□ 2.64
PTPRUQ92729 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTPRUQ92729 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTPRUQ92729 AC016769.1-201ENST00000409132 1010 ntBASIC31.53■■■□□ 2.64
PTPRUQ92729 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.53■■■□□ 2.64
PTPRUQ92729 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTPRUQ92729 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.53■■■□□ 2.64
PTPRUQ92729 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.53■■■□□ 2.64
PTPRUQ92729 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTPRUQ92729 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTPRUQ92729 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.52■■■□□ 2.64
PTPRUQ92729 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTPRUQ92729 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.52■■■□□ 2.64
PTPRUQ92729 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PTPRUQ92729 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
PTPRUQ92729 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.52■■■□□ 2.64
PTPRUQ92729 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
PTPRUQ92729 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.51■■■□□ 2.64
PTPRUQ92729 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
PTPRUQ92729 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
PTPRUQ92729 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.51■■■□□ 2.63
PTPRUQ92729 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.51■■■□□ 2.63
PTPRUQ92729 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTPRUQ92729 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
PTPRUQ92729 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.5■■■□□ 2.63
PTPRUQ92729 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.5■■■□□ 2.63
PTPRUQ92729 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.5■■■□□ 2.63
PTPRUQ92729 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTPRUQ92729 ESRRAP2-201ENST00000418437 1549 ntBASIC31.5■■■□□ 2.63
PTPRUQ92729 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTPRUQ92729 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PTPRUQ92729 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.5■■■□□ 2.63
PTPRUQ92729 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.5■■■□□ 2.63
PTPRUQ92729 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.49■■■□□ 2.63
PTPRUQ92729 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.49■■■□□ 2.63
PTPRUQ92729 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.49■■■□□ 2.63
PTPRUQ92729 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
PTPRUQ92729 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PTPRUQ92729 FP325331.1-202ENST00000623531 1380 ntBASIC31.49■■■□□ 2.63
PTPRUQ92729 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
PTPRUQ92729 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PTPRUQ92729 AL355802.2-201ENST00000402069 882 ntBASIC31.48■■■□□ 2.63
PTPRUQ92729 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.48■■■□□ 2.63
PTPRUQ92729 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.48■■■□□ 2.63
PTPRUQ92729 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PTPRUQ92729 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
PTPRUQ92729 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PTPRUQ92729 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PTPRUQ92729 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PTPRUQ92729 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.47■■■□□ 2.63
PTPRUQ92729 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.47■■■□□ 2.63
PTPRUQ92729 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
PTPRUQ92729 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.47■■■□□ 2.63
PTPRUQ92729 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PTPRUQ92729 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PTPRUQ92729 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PTPRUQ92729 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.46■■■□□ 2.63
PTPRUQ92729 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.46■■■□□ 2.63
PTPRUQ92729 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.46■■■□□ 2.63
PTPRUQ92729 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.46■■■□□ 2.63
PTPRUQ92729 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PTPRUQ92729 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PTPRUQ92729 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PTPRUQ92729 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.45■■■□□ 2.63
PTPRUQ92729 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
PTPRUQ92729 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.45■■■□□ 2.63
PTPRUQ92729 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.45■■■□□ 2.63
PTPRUQ92729 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.45■■■□□ 2.63
PTPRUQ92729 BID-214ENST00000617586 542 ntTSL 5 BASIC31.45■■■□□ 2.63
PTPRUQ92729 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PTPRUQ92729 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PTPRUQ92729 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.45■■■□□ 2.63
PTPRUQ92729 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.45■■■□□ 2.62
PTPRUQ92729 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PTPRUQ92729 AC145676.1-201ENST00000514988 2004 ntBASIC31.44■■■□□ 2.62
PTPRUQ92729 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPRUQ92729 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPRUQ92729 NCF1B-203ENST00000435988 1254 ntBASIC31.43■■■□□ 2.62
PTPRUQ92729 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPRUQ92729 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPRUQ92729 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
PTPRUQ92729 AL109923.1-201ENST00000618799 583 ntBASIC31.42■■■□□ 2.62
PTPRUQ92729 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTPRUQ92729 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms