Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.78■■□□□ 1.4
SHC3Q92529 AL356740.2-201ENST00000601559 647 ntBASIC23.78■■□□□ 1.4
SHC3Q92529 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.78■■□□□ 1.4
SHC3Q92529 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHC3Q92529 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.77■■□□□ 1.4
SHC3Q92529 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.77■■□□□ 1.4
SHC3Q92529 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.77■■□□□ 1.4
SHC3Q92529 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.77■■□□□ 1.4
SHC3Q92529 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHC3Q92529 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SHC3Q92529 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.76■■□□□ 1.39
SHC3Q92529 AC009086.3-201ENST00000623486 1008 ntBASIC23.76■■□□□ 1.39
SHC3Q92529 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHC3Q92529 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC3Q92529 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHC3Q92529 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC3Q92529 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
SHC3Q92529 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHC3Q92529 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC3Q92529 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHC3Q92529 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC3Q92529 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.75■■□□□ 1.39
SHC3Q92529 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHC3Q92529 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.75■■□□□ 1.39
SHC3Q92529 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHC3Q92529 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.74■■□□□ 1.39
SHC3Q92529 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SHC3Q92529 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SHC3Q92529 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
SHC3Q92529 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.74■■□□□ 1.39
SHC3Q92529 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.74■■□□□ 1.39
SHC3Q92529 ESRRAP2-201ENST00000418437 1549 ntBASIC23.74■■□□□ 1.39
SHC3Q92529 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHC3Q92529 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC3Q92529 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.73■■□□□ 1.39
SHC3Q92529 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHC3Q92529 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.73■■□□□ 1.39
SHC3Q92529 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC3Q92529 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.73■■□□□ 1.39
SHC3Q92529 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC3Q92529 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC3Q92529 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHC3Q92529 AL117328.2-201ENST00000624617 1940 ntBASIC23.72■■□□□ 1.39
SHC3Q92529 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.72■■□□□ 1.39
SHC3Q92529 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.72■■□□□ 1.39
SHC3Q92529 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.72■■□□□ 1.39
SHC3Q92529 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
SHC3Q92529 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 AL512631.2-201ENST00000604634 923 ntBASIC23.72■■□□□ 1.39
SHC3Q92529 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.72■■□□□ 1.39
SHC3Q92529 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SHC3Q92529 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.72■■□□□ 1.39
SHC3Q92529 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHC3Q92529 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.71■■□□□ 1.39
SHC3Q92529 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHC3Q92529 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.71■■□□□ 1.39
SHC3Q92529 AL499627.2-201ENST00000606283 725 ntBASIC23.71■■□□□ 1.39
SHC3Q92529 AC241377.3-202ENST00000626088 1088 ntBASIC23.71■■□□□ 1.39
SHC3Q92529 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.71■■□□□ 1.39
SHC3Q92529 AC241585.3-202ENST00000628937 1088 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms