Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40AQ8WXH6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 KRT125P-201ENST00000546827 989 ntBASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 AC011551.1-201ENST00000614101 683 ntBASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB40AQ8WXH6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB40AQ8WXH6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 AC137630.3-201ENST00000607245 391 ntBASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 AL024507.2-201ENST00000606070 2574 ntBASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40AQ8WXH6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB40AQ8WXH6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 MIR4281-201ENST00000580852 62 ntBASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 AL022069.1-201ENST00000568025 1636 ntBASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB40AQ8WXH6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 MIR4787-201ENST00000607364 84 ntBASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40AQ8WXH6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms