Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AL136162.1-201ENST00000607711 1078 ntBASIC22.68■■□□□ 1.22
CHD5Q8TDI0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD5Q8TDI0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 DUSP8P5-201ENST00000422884 1815 ntBASIC22.67■■□□□ 1.22
CHD5Q8TDI0 EDA-201ENST00000338901 1233 ntBASIC22.67■■□□□ 1.22
CHD5Q8TDI0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 MIR4767-201ENST00000582827 78 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.6-201ENST00000610482 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.5-201ENST00000612139 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.11-201ENST00000618423 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.13-201ENST00000619112 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD5Q8TDI0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD5Q8TDI0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 AC004687.1-201ENST00000579003 1625 ntBASIC22.64■■□□□ 1.21
CHD5Q8TDI0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 OR2I1P-207ENST00000453522 948 ntBASIC22.63■■□□□ 1.21
CHD5Q8TDI0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 PBX2P1-201ENST00000493219 1291 ntBASIC22.63■■□□□ 1.21
CHD5Q8TDI0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 AF213884.3-201ENST00000563833 479 ntBASIC22.62■■□□□ 1.21
CHD5Q8TDI0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 MIR939-201ENST00000401314 82 ntBASIC22.61■■□□□ 1.21
CHD5Q8TDI0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.61■■□□□ 1.21
CHD5Q8TDI0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms