Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 AC144652.1-201ENST00000609974 1624 ntBASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.09■■□□□ 1.77
SMARCC2Q8TAQ2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.08■■□□□ 1.77
SMARCC2Q8TAQ2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.08■■□□□ 1.77
SMARCC2Q8TAQ2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC2Q8TAQ2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
SMARCC2Q8TAQ2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMARCC2Q8TAQ2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 AC233723.2-201ENST00000623798 2106 ntBASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMARCC2Q8TAQ2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMARCC2Q8TAQ2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.05■■□□□ 1.76
SMARCC2Q8TAQ2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMARCC2Q8TAQ2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SMARCC2Q8TAQ2 AC079834.2-201ENST00000609776 1949 ntBASIC26.03■■□□□ 1.76
SMARCC2Q8TAQ2 AL117328.2-201ENST00000624617 1940 ntBASIC26.03■■□□□ 1.76
SMARCC2Q8TAQ2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SMARCC2Q8TAQ2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMARCC2Q8TAQ2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMARCC2Q8TAQ2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 SRD5A1P1-201ENST00000442297 786 ntBASIC26.01■■□□□ 1.75
SMARCC2Q8TAQ2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMARCC2Q8TAQ2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SMARCC2Q8TAQ2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 AC009102.2-201ENST00000606772 1639 ntBASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms