Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNIP1Q8TAD8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 AC066615.1-201ENST00000640911 628 ntBASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNIP1Q8TAD8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.04■□□□□ 0.96
SNIP1Q8TAD8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 CD99P1-205ENST00000527459 561 ntBASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 TPRG1LP1-201ENST00000598702 760 ntBASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 AC092803.2-201ENST00000564287 1899 ntBASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNIP1Q8TAD8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNIP1Q8TAD8 ALDH1A3-203ENST00000557963 1670 ntBASIC21.02■□□□□ 0.95
SNIP1Q8TAD8 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNIP1Q8TAD8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21■□□□□ 0.95
SNIP1Q8TAD8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21■□□□□ 0.95
SNIP1Q8TAD8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNIP1Q8TAD8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNIP1Q8TAD8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 AC004854.2-201ENST00000608450 1441 ntBASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 GPX1P1-201ENST00000388829 606 ntBASIC20.98■□□□□ 0.95
SNIP1Q8TAD8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms