Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 DUX4L4-201ENST00000566884 1269 ntBASIC20.78■□□□□ 0.92
NUP43Q8NFH3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 AC233723.2-201ENST00000623798 2106 ntBASIC20.78■□□□□ 0.92
NUP43Q8NFH3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP43Q8NFH3 C17orf82-201ENST00000623772 1530 ntBASIC20.78■□□□□ 0.92
NUP43Q8NFH3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
NUP43Q8NFH3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP43Q8NFH3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NUP43Q8NFH3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUP43Q8NFH3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUP43Q8NFH3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 AL117332.1-201ENST00000622628 974 ntBASIC20.76■□□□□ 0.91
NUP43Q8NFH3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP43Q8NFH3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 AL356740.2-201ENST00000601559 647 ntBASIC20.75■□□□□ 0.91
NUP43Q8NFH3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
NUP43Q8NFH3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUP43Q8NFH3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 AC009086.3-201ENST00000623486 1008 ntBASIC20.73■□□□□ 0.91
NUP43Q8NFH3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NUP43Q8NFH3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.72■□□□□ 0.91
NUP43Q8NFH3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUP43Q8NFH3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUP43Q8NFH3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms