Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 AC009102.2-201ENST00000606772 1639 ntBASIC20.81■□□□□ 0.92
PSD4Q8NDX1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PSD4Q8NDX1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 AL024507.2-201ENST00000606070 2574 ntBASIC20.8■□□□□ 0.92
PSD4Q8NDX1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PSD4Q8NDX1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PSD4Q8NDX1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PSD4Q8NDX1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 UNC93B3-201ENST00000308076 687 ntBASIC20.77■□□□□ 0.92
PSD4Q8NDX1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 AC092171.4-201ENST00000609130 632 ntBASIC20.77■□□□□ 0.92
PSD4Q8NDX1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PSD4Q8NDX1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
PSD4Q8NDX1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PSD4Q8NDX1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PSD4Q8NDX1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 PBX2P1-201ENST00000493219 1291 ntBASIC20.76■□□□□ 0.91
PSD4Q8NDX1 DUX4L19-201ENST00000557448 1267 ntBASIC20.76■□□□□ 0.91
PSD4Q8NDX1 AC106739.1-201ENST00000617035 715 ntBASIC20.76■□□□□ 0.91
PSD4Q8NDX1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PSD4Q8NDX1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 C17orf82-201ENST00000623772 1530 ntBASIC20.75■□□□□ 0.91
PSD4Q8NDX1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 AC133561.4-201ENST00000566112 224 ntBASIC20.75■□□□□ 0.91
PSD4Q8NDX1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 AL136162.1-201ENST00000607711 1078 ntBASIC20.75■□□□□ 0.91
PSD4Q8NDX1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.75■□□□□ 0.91
PSD4Q8NDX1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
PSD4Q8NDX1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms