Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMRP1Q8NCR6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SMRP1Q8NCR6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 KRT19P1-201ENST00000405746 1186 ntBASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 CD99P1-205ENST00000527459 561 ntBASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.29■■□□□ 1.32
SMRP1Q8NCR6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 AC066615.1-201ENST00000640911 628 ntBASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMRP1Q8NCR6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.27■■□□□ 1.32
SMRP1Q8NCR6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.27■■□□□ 1.32
SMRP1Q8NCR6 MIR663A-201ENST00000385250 93 ntBASIC23.27■■□□□ 1.32
SMRP1Q8NCR6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMRP1Q8NCR6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMRP1Q8NCR6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 GPX1P1-201ENST00000388829 606 ntBASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMRP1Q8NCR6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 AC011767.1-201ENST00000617410 1153 ntBASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMRP1Q8NCR6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 KRT18P11-201ENST00000435214 1283 ntBASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 DUSP8P4-201ENST00000399538 1761 ntBASIC23.24■■□□□ 1.31
SMRP1Q8NCR6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 AC142086.2-201ENST00000569753 217 ntBASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 BX005040.4-201ENST00000637145 1518 ntBASIC23.23■■□□□ 1.31
SMRP1Q8NCR6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SMRP1Q8NCR6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms