Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC9BQ8N6N2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 IGHV3-19-201ENST00000521488 291 ntBASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC9BQ8N6N2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
TTC9BQ8N6N2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.35
TTC9BQ8N6N2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TTC9BQ8N6N2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.45■■□□□ 1.35
TTC9BQ8N6N2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TTC9BQ8N6N2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC9BQ8N6N2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 AC092666.2-201ENST00000613287 246 ntBASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 AL031602.1-201ENST00000633169 911 ntBASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 AL353803.4-201ENST00000565882 1934 ntBASIC23.43■■□□□ 1.34
TTC9BQ8N6N2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 MIR6084-201ENST00000622012 110 ntBASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TTC9BQ8N6N2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
TTC9BQ8N6N2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.41■■□□□ 1.34
TTC9BQ8N6N2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TTC9BQ8N6N2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.41■■□□□ 1.34
TTC9BQ8N6N2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TTC9BQ8N6N2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 AL162430.1-201ENST00000480705 870 ntBASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 AC004687.1-201ENST00000579003 1625 ntBASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC9BQ8N6N2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TTC9BQ8N6N2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TTC9BQ8N6N2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms