Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 AL136116.3-201ENST00000402907 1138 ntBASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 AC092068.2-201ENST00000590491 1708 ntBASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 FP325331.1-202ENST00000623531 1380 ntBASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf42Q8N5U0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
C11orf42Q8N5U0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 SRD5A1P1-201ENST00000442297 786 ntBASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C11orf42Q8N5U0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C11orf42Q8N5U0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC012676.1-201ENST00000574705 1949 ntBASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC099791.2-201ENST00000605725 427 ntBASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC241377.3-202ENST00000626088 1088 ntBASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC241585.3-202ENST00000628937 1088 ntBASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC245100.8-202ENST00000629247 1058 ntBASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C11orf42Q8N5U0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 DUX4L4-201ENST00000566884 1269 ntBASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
C11orf42Q8N5U0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 AL353803.4-201ENST00000565882 1934 ntBASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 LINC01529-204ENST00000636474 1715 ntBASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.35■□□□□ 0.53
C11orf42Q8N5U0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms