Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DUX4L4-201ENST00000566884 1269 ntBASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 AL136967.2-201ENST00000623968 743 ntBASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 MIR935-201ENST00000401179 91 ntBASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM48Q8IWZ4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM48Q8IWZ4 AC133637.1-201ENST00000624115 1537 ntBASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 AC105265.2-201ENST00000467189 838 ntBASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 RASA4CP-201ENST00000424092 1398 ntBASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM48Q8IWZ4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 AC099791.1-201ENST00000416440 715 ntBASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 CA15P2-201ENST00000611168 834 ntBASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM48Q8IWZ4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 AC079630.1-202ENST00000618127 1840 ntBASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 BX842568.3-201ENST00000418104 571 ntBASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 AC233992.3-201ENST00000607491 485 ntBASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM48Q8IWZ4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 AL499627.2-201ENST00000606283 725 ntBASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM48Q8IWZ4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM48Q8IWZ4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms