Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
LYSMD2Q8IV50 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 AL157400.5-201ENST00000507624 621 ntBASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.52■□□□□ 0.72
LYSMD2Q8IV50 AL161729.1-201ENST00000604104 1402 ntBASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 MIR3960-201ENST00000583311 91 ntBASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LYSMD2Q8IV50 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD2Q8IV50 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 CR559946.2-201ENST00000623684 991 ntBASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 AC010542.4-201ENST00000563151 1910 ntBASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD2Q8IV50 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 ZNRF2P2-203ENST00000454624 420 ntBASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD2Q8IV50 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.47■□□□□ 0.71
LYSMD2Q8IV50 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 SMPD5-203ENST00000639008 1464 ntBASIC19.46■□□□□ 0.71
LYSMD2Q8IV50 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms