Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC28Q86X40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC28Q86X40 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 AL161729.1-201ENST00000604104 1402 ntBASIC19.68■□□□□ 0.74
LRRC28Q86X40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC28Q86X40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC28Q86X40 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC28Q86X40 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC28Q86X40 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC28Q86X40 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC28Q86X40 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC28Q86X40 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 BX664725.1-201ENST00000438252 379 ntBASIC19.66■□□□□ 0.74
LRRC28Q86X40 AC239859.2-201ENST00000444165 318 ntBASIC19.66■□□□□ 0.74
LRRC28Q86X40 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.66■□□□□ 0.74
LRRC28Q86X40 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 AC137630.3-201ENST00000607245 391 ntBASIC19.66■□□□□ 0.74
LRRC28Q86X40 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC28Q86X40 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC28Q86X40 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC28Q86X40 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC28Q86X40 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC28Q86X40 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.64■□□□□ 0.74
LRRC28Q86X40 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC28Q86X40 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC28Q86X40 MIR4281-201ENST00000580852 62 ntBASIC19.64■□□□□ 0.73
LRRC28Q86X40 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LRRC28Q86X40 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC28Q86X40 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRRC28Q86X40 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC28Q86X40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC28Q86X40 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LRRC28Q86X40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LRRC28Q86X40 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC28Q86X40 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC28Q86X40 KRT125P-201ENST00000546827 989 ntBASIC19.63■□□□□ 0.73
LRRC28Q86X40 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC28Q86X40 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC28Q86X40 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC28Q86X40 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC28Q86X40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms