Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.91■■□□□ 1.58
RNF180Q86T96 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF180Q86T96 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF180Q86T96 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF180Q86T96 LINC01529-204ENST00000636474 1715 ntBASIC24.9■■□□□ 1.58
RNF180Q86T96 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RNF180Q86T96 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.9■■□□□ 1.58
RNF180Q86T96 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.9■■□□□ 1.58
RNF180Q86T96 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.9■■□□□ 1.58
RNF180Q86T96 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF180Q86T96 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF180Q86T96 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
RNF180Q86T96 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.9■■□□□ 1.58
RNF180Q86T96 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF180Q86T96 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF180Q86T96 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.89■■□□□ 1.58
RNF180Q86T96 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.89■■□□□ 1.58
RNF180Q86T96 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.89■■□□□ 1.58
RNF180Q86T96 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.89■■□□□ 1.58
RNF180Q86T96 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
RNF180Q86T96 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF180Q86T96 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF180Q86T96 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.89■■□□□ 1.58
RNF180Q86T96 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RNF180Q86T96 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF180Q86T96 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF180Q86T96 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.89■■□□□ 1.57
RNF180Q86T96 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF180Q86T96 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RNF180Q86T96 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF180Q86T96 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.88■■□□□ 1.57
RNF180Q86T96 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF180Q86T96 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF180Q86T96 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
RNF180Q86T96 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF180Q86T96 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF180Q86T96 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.87■■□□□ 1.57
RNF180Q86T96 AC144652.1-201ENST00000609974 1624 ntBASIC24.87■■□□□ 1.57
RNF180Q86T96 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF180Q86T96 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF180Q86T96 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF180Q86T96 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.87■■□□□ 1.57
RNF180Q86T96 RAP2CP1-201ENST00000605103 478 ntBASIC24.87■■□□□ 1.57
RNF180Q86T96 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.87■■□□□ 1.57
RNF180Q86T96 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.87■■□□□ 1.57
RNF180Q86T96 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF180Q86T96 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.86■■□□□ 1.57
RNF180Q86T96 CDCA4P2-201ENST00000441182 718 ntBASIC24.86■■□□□ 1.57
RNF180Q86T96 KRT18P61-201ENST00000585825 1298 ntBASIC24.86■■□□□ 1.57
RNF180Q86T96 AC073111.5-205ENST00000641717 521 ntBASIC24.86■■□□□ 1.57
RNF180Q86T96 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF180Q86T96 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF180Q86T96 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF180Q86T96 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RNF180Q86T96 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF180Q86T96 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF180Q86T96 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.85■■□□□ 1.57
RNF180Q86T96 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF180Q86T96 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF180Q86T96 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF180Q86T96 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF180Q86T96 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF180Q86T96 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF180Q86T96 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF180Q86T96 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF180Q86T96 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF180Q86T96 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF180Q86T96 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF180Q86T96 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.84■■□□□ 1.57
RNF180Q86T96 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.84■■□□□ 1.57
RNF180Q86T96 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.84■■□□□ 1.57
RNF180Q86T96 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF180Q86T96 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF180Q86T96 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF180Q86T96 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
RNF180Q86T96 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF180Q86T96 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 AC026185.1-201ENST00000445748 174 ntBASIC24.83■■□□□ 1.57
RNF180Q86T96 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.83■■□□□ 1.57
RNF180Q86T96 TPRG1LP1-201ENST00000598702 760 ntBASIC24.83■■□□□ 1.57
RNF180Q86T96 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RNF180Q86T96 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.83■■□□□ 1.56
RNF180Q86T96 AC135731.1-201ENST00000569415 2548 ntBASIC24.82■■□□□ 1.56
RNF180Q86T96 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
RNF180Q86T96 AP003733.4-201ENST00000623785 1697 ntBASIC24.82■■□□□ 1.56
RNF180Q86T96 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF180Q86T96 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.82■■□□□ 1.56
RNF180Q86T96 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF180Q86T96 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF180Q86T96 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms