Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL55Q7Z7F7 AC079630.1-202ENST00000618127 1840 ntBASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 SNX5-217ENST00000606557 1087 ntBASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 AC137630.3-201ENST00000607245 391 ntBASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 AC233723.2-201ENST00000623798 2106 ntBASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL55Q7Z7F7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC14.21□□□□□ -0.13
MRPL55Q7Z7F7 AC079834.2-201ENST00000609776 1949 ntBASIC14.21□□□□□ -0.14
MRPL55Q7Z7F7 AL117328.2-201ENST00000624617 1940 ntBASIC14.21□□□□□ -0.14
MRPL55Q7Z7F7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.21□□□□□ -0.14
MRPL55Q7Z7F7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 C1orf229-201ENST00000623686 2258 ntBASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MRPL55Q7Z7F7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 BX664725.1-201ENST00000438252 379 ntBASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MRPL55Q7Z7F7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL55Q7Z7F7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms