Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LINC01529-204ENST00000636474 1715 ntBASIC25.17■■□□□ 1.62
SHC4Q6S5L8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SHC4Q6S5L8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 AC127496.7-201ENST00000625110 1798 ntBASIC25.16■■□□□ 1.62
SHC4Q6S5L8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHC4Q6S5L8 LINC00565-201ENST00000562710 2331 ntBASIC25.15■■□□□ 1.62
SHC4Q6S5L8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 FP325331.1-202ENST00000623531 1380 ntBASIC25.15■■□□□ 1.62
SHC4Q6S5L8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 AC009102.2-201ENST00000606772 1639 ntBASIC25.15■■□□□ 1.62
SHC4Q6S5L8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHC4Q6S5L8 AC087742.1-201ENST00000575880 1738 ntBASIC25.15■■□□□ 1.62
SHC4Q6S5L8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.14■■□□□ 1.62
SHC4Q6S5L8 MTDHP2-201ENST00000601468 714 ntBASIC25.14■■□□□ 1.62
SHC4Q6S5L8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHC4Q6S5L8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHC4Q6S5L8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.14■■□□□ 1.61
SHC4Q6S5L8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHC4Q6S5L8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHC4Q6S5L8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 AC242852.2-201ENST00000615738 1807 ntBASIC25.12■■□□□ 1.61
SHC4Q6S5L8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.12■■□□□ 1.61
SHC4Q6S5L8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 AC010997.5-201ENST00000609182 354 ntBASIC25.11■■□□□ 1.61
SHC4Q6S5L8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHC4Q6S5L8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 TSPY9P-201ENST00000440215 945 ntBASIC25.1■■□□□ 1.61
SHC4Q6S5L8 TSPY11P-201ENST00000442607 1045 ntBASIC25.1■■□□□ 1.61
SHC4Q6S5L8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 DUX4L4-201ENST00000566884 1269 ntBASIC25.1■■□□□ 1.61
SHC4Q6S5L8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHC4Q6S5L8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHC4Q6S5L8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SHC4Q6S5L8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHC4Q6S5L8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHC4Q6S5L8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms