Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FAM53AQ6NSI3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.39■□□□□ 0.54
FAM53AQ6NSI3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 AC010997.5-201ENST00000609182 354 ntBASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 AL117328.2-201ENST00000624617 1940 ntBASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FAM53AQ6NSI3 AC144652.1-201ENST00000609974 1624 ntBASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 AL035685.1-201ENST00000636663 812 ntBASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FAM53AQ6NSI3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FAM53AQ6NSI3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 AC009102.2-201ENST00000606772 1639 ntBASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FAM53AQ6NSI3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
FAM53AQ6NSI3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 GUSBP5-202ENST00000510805 1989 ntBASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 AC079834.2-201ENST00000609776 1949 ntBASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FAM53AQ6NSI3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM53AQ6NSI3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FAM53AQ6NSI3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FAM53AQ6NSI3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FAM53AQ6NSI3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FAM53AQ6NSI3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms