Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 AC104564.3-201ENST00000582367 638 ntBASIC20.01■□□□□ 0.79
RTL6Q6ICC9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20■□□□□ 0.79
RTL6Q6ICC9 SLC47A1P1-202ENST00000449666 945 ntBASIC20■□□□□ 0.79
RTL6Q6ICC9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20■□□□□ 0.79
RTL6Q6ICC9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20■□□□□ 0.79
RTL6Q6ICC9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
RTL6Q6ICC9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL6Q6ICC9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 AC126544.1-201ENST00000580842 1059 ntBASIC19.99■□□□□ 0.79
RTL6Q6ICC9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL6Q6ICC9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL6Q6ICC9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RTL6Q6ICC9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 AL162430.1-201ENST00000480705 870 ntBASIC19.96■□□□□ 0.79
RTL6Q6ICC9 AL499627.2-201ENST00000606283 725 ntBASIC19.96■□□□□ 0.79
RTL6Q6ICC9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 AC133637.1-201ENST00000624115 1537 ntBASIC19.96■□□□□ 0.79
RTL6Q6ICC9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL6Q6ICC9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 TSPY26P-201ENST00000476365 1326 ntBASIC19.95■□□□□ 0.78
RTL6Q6ICC9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTL6Q6ICC9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL6Q6ICC9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms